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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911458.1_cds_XP_016461431.1_54754
CDS Infomation

[gene=LOC107784768] [db_xref=GeneID:107784768] [protein=cysteine proteinase 3] [protein_id=XP_016461431.1] [location=join(43068..43267,43506..43627,44428..44543,44900..44973,45072..45336,45445..45576,45791..45964)] [gbkey=CDS]
Sequence

ATGTCTCGTTTCTCACTCCTATTGGCTCTCGTCGTCGCCGGTGGCCTTTTCGCCTCCGCA
CTCGCCGGACCGGCGACCTTTGCCGATGAGAATCCGATCAGACAAGTCGTTTCTGACGGT
TTACATGAGCTGGAGAACGCAATTCTCCAAGTCGTCGGCAAGACCCGCCATGCTCTCTCC
TTCGCTCGCTTTGCTCACAGGTATGGGAAGAGGTACGAGTCAGTTGAGGAGATAAAGCAA
AGGTTCGAGGTATTTTTGGACAATTTGAAGATGATTCGATCGCACAACAAGAAAGGACTA
TCATACAAACTCGGTGTCAATGAGTTTACCGACCTAACATGGGACGAGTTCCGGAGAGAC
AGGTTGGGGGCAGCTCAAAACTGTTCAGCCACCACAAAGGGCAATCTCAAAGTCACTAAC
GTTGTTCTGCCGGAGACGAAAGACTGGCGGGAAGCTGGGATTGTCAGCCCAGTCAAGAAC
CAGGGCAAGTGCGGATCTTGCTGGACATTCAGCACTACTGGTGCACTAGAAGCAGCATAT
AGCCAAGCATTTGGGAAGGGAATCTCTCTATCTGAGCAGCAGCTTGTGGACTGTGCTGGA
GCTTTTAATAACTTTGGCTGCAATGGTGGGCTCCCATCACAAGCCTTTGAGTATATTAAA
TCCAATGGTGGTCTTGACACTGAAGAAGCATATCCATACACTGGCAAGAATGGCTTATGT
AAATTCTCATCAGAAAATGTTGGTGTCAAAGTCATCGATTCCGTCAATATTACCCTGGGT
GCTGAAGATGAACTAAAATACGCGGTTGCATTGGTTAGGCCCGTTAGTATAGCTTTTGAG
GTGATAAAAGGTTTCAAACAATACAAGAGTGGTGTTTACACCAGCACCGAATGCGGCAAC
ACTCCCATGGATGTAAACCATGCTGTTCTTGCTGTGGGTTACGGTGTTGAAAATGGTGTT
CCCTATTGGCTCATCAAGAATTCATGGGGAGCAGATTGGGGTGACAATGGATACTTCAAA
ATGGAGATGGGAAAGAACATGTGTGGTATTGCCACTTGCGCATCCTACCCTGTCGTTGCC
TGA

Peptide Sequence

PEP ID

XP_016461431.1
PEP Infomation

PREDICTED: cysteine proteinase 3 [Nicotiana tabacum]
Sequence

MSRFSLLLALVVAGGLFASALAGPATFADENPIRQVVSDGLHELENAILQVVGKTRHALS
FARFAHRYGKRYESVEEIKQRFEVFLDNLKMIRSHNKKGLSYKLGVNEFTDLTWDEFRRD
RLGAAQNCSATTKGNLKVTNVVLPETKDWREAGIVSPVKNQGKCGSCWTFSTTGALEAAY
SQAFGKGISLSEQQLVDCAGAFNNFGCNGGLPSQAFEYIKSNGGLDTEEAYPYTGKNGLC
KFSSENVGVKVIDSVNITLGAEDELKYAVALVRPVSIAFEVIKGFKQYKSGVYTSTECGN
TPMDVNHAVLAVGYGVENGVPYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCASYPVVA

Transcript Sequence

Gene sequence data has not been registered.